Posts Tagged ‘ University life ’

Bayesian Essentials with R [book review]

July 27, 2016
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Bayesian Essentials with R [book review]

[A review of Bayesian Essentials that appeared in Technometrics two weeks ago, with the first author being rechristened Jean-Michael!] “Overall this book is a very helpful and useful introduction to Bayesian methods of data analysis. I found the use of R, the code in the book, and the companion R package, bayess, to be helpful […]

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the curious incident of the inverse of the mean

July 14, 2016
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the curious incident of the inverse of the mean

A s I figured out while working with astronomer colleagues last week, a strange if understandable difficulty proceeds from the simplest and most studied statistical model, namely the Normal model x~N(θ,1) Indeed, if one reparametrises this model as x~N(υ⁻¹,1) with υ>0, a single observation x brings very little information about υ! (This is not a […]

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correlation matrices on copulas

July 3, 2016
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correlation matrices on copulas

Following my post of yesterday about the missing condition in Lynch’s R code, Gérard Letac sent me a paper he recently wrote with Luc Devroye on correlation matrices and copulas. Paper written for the memorial volume in honour of Marc Yor. It considers the neat problem of the existence of a copula (on [0,1]x…x[0,1]) associated […]

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another wrong entry

June 26, 2016
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another wrong entry

Quite a coincidence! I just came across another bug in Lynch’s (2007) book, Introduction to Applied Bayesian Statistics and Estimation for Social Scientists. Already discussed here and on X validated. While working with one participant to the post-ISBA softshop, we were looking for efficient approaches to simulating correlation matrices and came [by Google] across the […]

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data challenge in Sardinia

June 9, 2016
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data challenge in Sardinia

In what I hope is the first occurrence of a new part of ISBA conferences, Booking.com is launching a data challenge at ISBA 2016 next week. The prize being a trip to take part in their monthly hackathon. In Amsterdam. It would be terrific if our Bayesian conferences, including BayesComp, could gather enough data and […]

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the new version of abcrf

June 6, 2016
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the new version of abcrf

A new version of the R package abcrf has been posted on Friday by Jean-Michel Marin, in conjunction with the recent arXival of our paper on point estimation via ABC and random forests. The new R functions come to supplement the existing ones towards implementing ABC point estimation: covRegAbcrf, which predicts the posterior covariance between […]

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ABC random forests for Bayesian parameter inference

May 19, 2016
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ABC random forests for Bayesian parameter inference

Before leaving Helsinki, we arXived [from the Air France lounge!] the paper Jean-Michel presented on Monday at ABCruise in Helsinki. This paper summarises the experiments Louis conducted over the past months to assess the great performances of a random forest regression approach to ABC parameter inference. Thus validating in this experimental sense the use of […]

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Using MCMC output to efficiently estimate Bayes factors

May 18, 2016
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Using MCMC output to efficiently estimate Bayes factors

As I was checking for software to answer a query on X validated about generic Bayes factor derivation, I came across an R software called BayesFactor, which only applies in regression settings and relies on the Savage-Dickey representation of the Bayes factor when the null hypothesis writes as θ=θ⁰ (and possibly additional nuisance parameters with […]

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reversible chain[saw] massacre

May 15, 2016
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reversible chain[saw] massacre

A paper in Nature this week that uses reversible-jump MCMC, phylogenetic trees, and Bayes factors. And that looks at institutionalised or ritual murders in Austronesian cultures. How better can it get?! “by applying Bayesian phylogenetic methods (…) we find strong support for models in which human sacrifice stabilizes social stratification once stratification has arisen, and […]

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Statistical rethinking [book review]

April 5, 2016
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Statistical rethinking [book review]

Statistical Rethinking: A Bayesian Course with Examples in R and Stan is a new book by Richard McElreath that CRC Press sent me for review in CHANCE. While the book was already discussed on Andrew’s blog three months ago, and [rightly so!] enthusiastically recommended by Rasmus Bååth on Amazon, here are the reasons why I […]

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