Blog Archives

Stan 2.7 (CRAN, variational inference, and much much more)

July 22, 2015
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Stan 2.7 (CRAN, variational inference, and much much more)

Stan 2.7 is now available for all interfaces. As usual, everything you need can be found starting from the Stan home page: http://mc-stan.org/ Highlights RStan is on CRAN!(1) Variational Inference in CmdStan!!(2) Two new Stan developers!!!  A whole new logo!!!!  Math library with autodiff now available in its own repo!!!!!  (1) Just doing install.packages(“rstan”) isn’t […] The post Stan 2.7 (CRAN, variational inference, and much much more) appeared first on…

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Don’t put your whiteboard behind your projection screen

July 20, 2015
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Daniel, Andrew, and I are on our second day of teaching, and like many places, Memorial Sloan-Kettering has all their classrooms set up with a whiteboard placed directly behind a projection screen. This gives us a sliver of space to write on without pulling the screen up and down. If you have any say in […] The post Don’t put your whiteboard behind your projection screen appeared first on Statistical…

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Introducing StataStan

June 29, 2015
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Introducing StataStan

Thanks to Robert Grant, we now have a Stata interface! For more details, see: Robert Grant’s Blog:   Introducing StataStan Jonah and Ben have already kicked the tires, and it works. We’ll be working on it more as time goes on as part of our Institute of Education Sciences grant (turns out education researchers use […] The post Introducing StataStan appeared first on Statistical Modeling, Causal Inference, and Social Science.

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JuliaCon 2015 (24–27 June, Boston-ish)

June 12, 2015
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JuliaCon 2015 (24–27 June, Boston-ish)

JuliaCon is coming to Cambridge, MA the geek capital of the East Coast: 24–27 June. Here’s the conference site with program. I (Bob) will be giving a 10 minute “lightning talk” on Stan.jl, the Julia interface to Stan (built by Rob J. Goedman — I’m just pinch hitting because Rob couldn’t make it). The uptake […] The post JuliaCon 2015 (24–27 June, Boston-ish) appeared first on Statistical Modeling, Causal Inference,…

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New Book: Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan

April 20, 2015
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New Book: Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan

Fränzi and Tobias‘s book is now real: Fränzi Korner-Nievergelt, Tobias Roth, Stefanie von Felten, Jérôme Guélat, Bettina Almasi, and Pius Korner-Nievergelt (2015) Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan. Academic Press. This is based in part on the in-person tutorials that they and the other authors have been giving […] The post New Book: Bayesian Data Analysis in Ecology Using Linear Models with R,…

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Summer Internship at Novartis: Stan PK/PD Modeling

April 11, 2015
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Summer Internship at Novartis:  Stan PK/PD Modeling

This looks like a great way to spend a summer: Summer Internship at Novartis Integrated Quantitative Sciences Here’s the job description: Bayesian modeling tools with Stan: Create re-usable tools for the Bayesian modeling of pharmacometrics data that can integrate diverse data sources (including pre-clinical, in-silico model predictions, etc.). Using the latest Stan’s facilities (http://mc-stan.org) develop […] The post Summer Internship at Novartis: Stan PK/PD Modeling appeared first on Statistical Modeling,…

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What do CERN, the ISS, and Stephen Fry have in Common?

March 18, 2015
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What do CERN, the ISS, and Stephen Fry have in Common?

You’ll have to read the New Yorker article on Richard M. Stallman and the The GNU Manifesto by Maria Bustillos to find out! And what’s up with Tim O’Reilly’s comments about the Old Testment vs. New Testament?   That’s an ad hominem attack of the highest order, guaranteed to get the Judeo-Christians even more riled […] The post What do CERN, the ISS, and Stephen Fry have in Common? appeared…

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Stan Down Under

February 15, 2015
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Stan Down Under

I (Bob, not Andrew) am in Australia until April 30. I’ll be giving some Stan-related and some data annotation talks, several of which have yet to be concretely scheduled. I’ll keep this page updated with what I’ll be up to. All of the talks other than summer school will be open to the public (the […] The post Stan Down Under appeared first on Statistical Modeling, Causal Inference, and Social…

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Stan 2.6.0 Released

February 12, 2015
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Stan 2.6.0 Released

We’re happy to announce the release of Stan 2.6, including RStan, PyStan, CmdStan; it will also work with the existing Stan.jl and MatlabStan. Although there is some new functionality (hence the minor version bump), this is primarily a maintenance release. It fixes all of the known memory issues with Stan 2.5.0 and improves overall speed […] The post Stan 2.6.0 Released appeared first on Statistical Modeling, Causal Inference, and Social…

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Stan 2.6.0 Released

February 12, 2015
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Stan 2.6.0 Released

We’re happy to announce the release of Stan 2.6, including RStan, PyStan, CmdStan; it will also work with the existing Stan.jl and MatlabStan. Although there is some new functionality (hence the minor version bump), this is primarily a maintenance release. It fixes all of the known memory issues with Stan 2.5.0 and improves overall speed […] The post Stan 2.6.0 Released appeared first on Statistical Modeling, Causal Inference, and Social…

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