Blog Archives

Evolutionary Computation and Data Mining in Biology

March 27, 2013
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Evolutionary Computation and Data Mining in Biology

For over 15 years, members of the computer science, machine learning, and data mining communities have gathered in a beautiful European location each spring to share ideas about biologically-inspired computation.  Stemming from the work of John Ho...

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Which political science journals will have a data policy?

March 18, 2013
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Which political science journals will have a data policy?

Making available replication materials for the research you do is A Good Thing. It’s also work, and it’s quite easy to never get around to. Certainly I claim no special virtue in this department so I am always happy when there’s an institutional stick to prod my better nature in the right direction. One such institutional [...]

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Which political science journals will have a data policy?

March 18, 2013
By
Which political science journals will have a data policy?

Making available replication materials for the research you do is A Good Thing. It’s also work, and it’s quite easy to never get around to. Certainly I claim no special virtue in this department so I am always happy when there’s an institutional stick to prod my better nature in the right direction. One such institutional [...]

Read more »

R to Latex packages: Coverage

March 12, 2013
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There are now quite a few R packages to turn cross-tables and fitted models into nicely formatted latex. In a previous post I showed how to use one of them to display regression tables on the fly. In this post I summarise what types of R object each of the major packages can deal with. [...]

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Tools for making a paper

March 1, 2013
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Since it seems to be the fashion, here’s a post about how I make my academic papers. Actually, who am I trying to kid? This is also about how I make slides, letters, memos and “Back in 10 minutes” signs to pin on the door. Nevertheless it’s for making academic papers that I’m going to [...]

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Tools for making a paper

March 1, 2013
By

Since it seems to be the fashion, here’s a post about how I make my academic papers. Actually, who am I trying to kid? This is also about how I make slides, letters, memos and “Back in 10 minutes” signs to pin on the door. Nevertheless it’s for making academic papers that I’m going to [...]

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NetGestalt for Data Visualization in the Context of Pathways

February 20, 2013
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NetGestalt for Data Visualization in the Context of Pathways

Many of you may be familiar with WebGestalt, a wonderful web utility developed by Bing Zhang at Vanderbilt for doing basic gene-set enrichment analyses. Last year, we invited Bing to speak at our annual retreat for the Vanderbilt Graduate Program in H...

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Quantifying the international search for meaning

February 9, 2013
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Quantifying the international search for meaning

Inspired by Preis et al.’s article Quantifying the advantage of looking forward, recently published in Scientific Reports (one of Nature publishing group’s journals), I wondered if similar big-data web-based research methods might address a question even bigger than how much different countries wonder about next year. How about the meaning of life. Who is searching [...]

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Quantifying the international search for meaning

February 9, 2013
By
Quantifying the international search for meaning

Inspired by Preis et al.’s article Quantifying the advantage of looking forward, recently published in Scientific Reports (one of Nature publishing group’s journals), I wondered if similar big-data web-based research methods might address a question even bigger than how much different countries wonder about next year. How about the meaning of life. Who is searching [...]

Read more »

Show me the pdf already

February 1, 2013
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You’ve got a pdf file and you’d like to view it with whatever the system viewer is. As usual, that requires something special for Windows and something general for the rest of us. Here goes… openPDF <- function(f) { os <- .Platform$OS.type if (os=="windows") shell.exec(normalizePath(f)) else { pdf <- getOption("pdfviewer", default='') if (nchar(pdf)==0) stop("The 'pdfviewer' [...]

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